Basic Information
Locus ID:
nbisL1-mrna-20976
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000883F_pilon | 1866171 | 1870906 | - | nbisL1-mrna-20976 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 68,290.86 Da | 40.15 | 86.24 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 374 | 588 | 4.3E-18 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 4 | 41 | 3.6E-10 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 12 | 111 | 2.67E-14 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 375 | 609 | 4.68E-32 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 288 | 406 | 1.1E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 6 | 118 | 2.7E-23 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 407 | 601 | 1.1E-26 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 330 | 593 | 14.831527 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 189 | 234 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 213 | 234 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.2 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021660271.1 | protein MALE DISCOVERER 2-like isoform X2 [Hevea brasiliensis] | 0 |
| C0LGQ4 | Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8CHY0 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_040776 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology