Basic Information
Locus ID:
nbisL1-mrna-20959
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 4679233 | 4682756 | + | nbisL1-mrna-20959 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 107,176.53 Da | 37.33 | 101.69 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 681 | 904 | 1.2E-43 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 21 | 59 | 1.8E-11 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 547 | 568 | 0.58 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 22 | 304 | 8.84E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 675 | 955 | 2.46E-74 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 238 | 587 | 4.32E-54 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 763 | 975 | 5.6E-63 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 135 | 6.3E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 136 | 232 | 7.0E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 233 | 615 | 9.1E-101 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 663 | 762 | 6.6E-23 | - |
| SMART | SM00220 | serkin_6 | 680 | 948 | 6.5E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 680 | 977 | 37.912346 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 569 | 591 | 7.018892 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 807 | 819 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 686 | 709 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 955 | 985 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_021636580.1 | receptor-like protein kinase HSL1 isoform X1 [Hevea brasiliensis] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | B9MYC8 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G016600 PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology