Basic Information
Locus ID:
nbisL1-mrna-20946
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001373F_pilon | 1336936 | 1339627 | + | nbisL1-mrna-20946 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.02 | 45,773.79 Da | 30.03 | 86.90 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 99 | 266 | 1.4E-24 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 77 | 337 | 7.65E-50 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 71 | 192 | 1.4E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 276 | 351 | 1.2E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 193 | 275 | 1.6E-20 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 93 | 407 | 23.538069 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 99 | 131 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28940.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_012092541.1 | serine/threonine-protein kinase PCRK1 [Jatropha curcas] | 0 |
| Q9SF86 | Serine/threonine-protein kinase PCRK1 OS=Arabidopsis thaliana OX=3702 GN=PCRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JCT1 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology