Basic Information
Locus ID:
nbisL1-mrna-209
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Short Name:
NHX1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001172F_pilon | 1206265 | 1213975 | + | nbisL1-mrna-209 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 70,786.55 Da | 38.22 | 104.82 | 0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 30 | 201 | 1.5E-22 | IPR006153 |
| Pfam | PF03931 | Skp1 family, tetramerisation domain | 477 | 543 | 7.3E-8 | IPR016073 |
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 213 | 387 | 9.2E-16 | IPR006153 |
| SUPERFAMILY | SSF54695 | POZ domain | 476 | 543 | 4.71E-6 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 471 | 623 | 1.3E-17 | IPR011333 |
| Gene3D | G3DSA:6.10.140.1330 | - | 145 | 197 | 2.5E-14 | - |
| SMART | SM00512 | skp1_3 | 475 | 585 | 3.9E-5 | IPR001232 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 113 | 121 | 5.8E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 153 | 163 | 5.8E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 98 | 112 | 5.8E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 84 | 95 | 5.8E-11 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27150.1 | Na+/H+ exchanger 1. Encodes a vacuolar sodium/proton antiporter involved in salt tolerance, ion homeostasis, and leaf development. | 0 |
| RefSeq | XP_021659529.1 | sodium/hydrogen exchanger 2-like [Hevea brasiliensis] | 0 |
| Q68KI4 | Sodium/hydrogen exchanger 1 OS=Arabidopsis thaliana OX=3702 GN=NHX1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2H4G897 | Sodium/hydrogen exchanger OS=Rhizophora apiculata OX=106626 GN=NHX PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology