Basic Information
Locus ID:
nbisL1-mrna-20883
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001373F_pilon | 1037840 | 1040087 | + | nbisL1-mrna-20883 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.74 | 50,213.48 Da | 42.63 | 81.80 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 126 | 396 | 1.9E-51 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 98 | 402 | 8.63E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 82 | 202 | 3.0E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 203 | 425 | 7.3E-56 | - |
| SMART | SM00220 | serkin_6 | 125 | 399 | 1.7E-42 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 125 | 401 | 39.707367 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 131 | 153 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 247 | 259 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 411 | 451 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 411 | 434 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58940.1 | calmodulin-binding receptor-like cytoplasmic kinase 1. Arabidopsis thaliana calmodulin-binding receptor-like kinase mRNA | 0 |
| RefSeq | XP_021682480.1 | calmodulin-binding receptor-like cytoplasmic kinase 1 [Hevea brasiliensis] | 0 |
| Q9FIL7 | Calmodulin-binding receptor-like cytoplasmic kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRCK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2K974 | Calmodulin-binding receptor-like cytoplasmic kinase 1 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology