Basic Information
Locus ID:
nbisL1-mrna-20878
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Protein STRUBBELIG-RECEPTOR FAMILY 3-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000883F_pilon | 1132449 | 1139766 | - | nbisL1-mrna-20878 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.34 | 55,953.11 Da | 45.34 | 85.20 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 34 | 93 | 1.1E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 345 | 492 | 1.2E-25 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 17 | 103 | 8.26E-20 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 316 | 494 | 1.18E-43 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2 | 123 | 2.6E-21 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 302 | 416 | 7.2E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 417 | 514 | 8.5E-19 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 341 | 515 | 25.432026 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 347 | 370 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20850.2 | - | 0 |
| RefSeq | XP_012091538.1 | protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1 [Jatropha curcas] | 0 |
| Q06BH3 | Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana OX=3702 GN=SRF1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A067JDS1 | Protein kinase domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_21384 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology