Basic Information
Locus ID:
nbisL1-mrna-20754
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000883F_pilon | 174808 | 180523 | - | nbisL1-mrna-20754 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 78,566.15 Da | 41.38 | 91.88 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 46 | 85 | 1.0E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 113 | 170 | 1.0E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 421 | 692 | 8.6E-43 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 253 | 9.78E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 395 | 694 | 3.32E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 386 | 497 | 8.0E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 499 | 721 | 3.7E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 43 | 269 | 1.6E-45 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 111 | 139 | 50.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 181 | 204 | 89.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 205 | 227 | 92.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 157 | 180 | 11.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 420 | 697 | 36.527214 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 278 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 297 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_021637699.1 | protein STRUBBELIG-RECEPTOR FAMILY 8-like [Hevea brasiliensis] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KHE3 | Uncharacterized protein MANES_16G003200 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology