Basic Information
Locus ID:
nbisL1-mrna-2075
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000017F_pilon | 7043732 | 7047505 | - | nbisL1-mrna-2075 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.41 | 113,370.90 Da | 32.35 | 98.75 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 202 | 262 | 5.0E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 275 | 334 | 1.2E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 514 | 573 | 3.6E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 718 | 986 | 1.5E-45 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 83 | 142 | 1.6E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 66 | 386 | 4.76E-62 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 314 | 623 | 7.6E-59 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 718 | 990 | 1.48E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 689 | 793 | 2.8E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 194 | 288 | 2.2E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 511 | 626 | 1.3E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 393 | 510 | 1.3E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 193 | 1.3E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 289 | 392 | 7.5E-32 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 794 | 1001 | 9.0E-58 | - |
| SMART | SM00369 | LRR_typ_2 | 129 | 153 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 249 | 272 | 360.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 345 | 369 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 560 | 583 | 270.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 715 | 994 | 9.1E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 201 | 225 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 297 | 321 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 441 | 465 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 273 | 296 | 310.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 715 | 994 | 37.078442 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 841 | 853 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 721 | 744 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_048229153.1 | leucine-rich repeat receptor-like protein kinase TDR [Ricinus communis] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U5PUQ2 | Protein kinase domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000176810 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology