Basic Information
Locus ID:
nbisL1-mrna-2074
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
BTB POZ and TAZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 17470987 | 17473866 | - | nbisL1-mrna-2074 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.04 | 45,501.70 Da | 49.50 | 87.61 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 195 | 238 | 3.92542E-6 | - |
| Pfam | PF02135 | TAZ zinc finger | 277 | 362 | 1.6E-13 | IPR000197 |
| Pfam | PF00651 | BTB/POZ domain | 85 | 190 | 3.0E-7 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 75 | 189 | 1.18E-13 | IPR011333 |
| SUPERFAMILY | SSF57933 | TAZ domain | 270 | 371 | 2.75E-23 | IPR035898 |
| Gene3D | G3DSA:1.25.40.420 | - | 194 | 269 | 1.8E-14 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 73 | 190 | 9.1E-17 | IPR011333 |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 270 | 393 | 5.4E-23 | IPR035898 |
| SMART | SM00225 | BTB_4 | 93 | 193 | 0.0025 | IPR000210 |
| SMART | SM00551 | TAZ_2 | 270 | 363 | 1.0E-36 | IPR000197 |
| ProSiteProfiles | PS50134 | Zinc finger TAZ-type profile. | 267 | 365 | 8.723916 | IPR000197 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 93 | 161 | 8.606758 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G05690.1 | BTB and TAZ domain protein 3. BTB and TAZ domain protein. Acts redunantly with BT1 and BT2 during female gametophyte development. Acts with BT2 during male gametophyte development. | 0 |
| RefSeq | XP_039072146.1 | BTB/POZ and TAZ domain-containing protein 3-like [Hibiscus syriacus] | 0 |
| Q9SYL0 | BTB/POZ and TAZ domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BT3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6A3BAU9 | BTB/POZ and TAZ domain-containing protein 3 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110206pilonHSYRG00133 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology