Basic Information
Locus ID:
nbisL1-mrna-20599
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
CSC1-like protein RXW8
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001441F_pilon | 931111 | 938830 | - | nbisL1-mrna-20599 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.07 | 87,055.86 Da | 42.01 | 99.23 | 0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 349 | 616 | 2.3E-74 | IPR003864 |
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 186 | 338 | 2.3E-22 | IPR027815 |
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 6 | 165 | 1.0E-37 | IPR032880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 756 | 771 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 701 | 718 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 723 | 749 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 701 | 771 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G58520.1 | lipases;hydrolases, acting on ester bonds. | 0 |
| RefSeq | XP_002510037.2 | CSC1-like protein RXW8 isoform X1 [Ricinus communis] | 0 |
| F4IBD7 | CSC1-like protein RXW8 OS=Arabidopsis thaliana OX=3702 GN=RXW8 PE=2 SV=1 | 0 | |
| TrEMBL | B9R6U4 | CSC1-like protein RXW8 OS=Ricinus communis OX=3988 GN=RCOM_1585590 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology