Basic Information
Locus ID:
nbisL1-mrna-20578
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 1895270 | 1900757 | - | nbisL1-mrna-20578 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 94,013.41 Da | 41.24 | 83.65 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 109 | 304 | 5.50076E-96 | - |
| Pfam | PF00183 | Hsp90 protein | 287 | 443 | 8.1E-51 | IPR001404 |
| Pfam | PF00183 | Hsp90 protein | 469 | 789 | 3.4E-130 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 122 | 282 | 8.9E-11 | IPR003594 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 663 | 783 | 4.45E-31 | IPR037196 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 100 | 314 | 5.89E-60 | IPR036890 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 360 | 640 | 1.67E-82 | IPR020568 |
| Gene3D | G3DSA:3.30.230.80 | - | 358 | 449 | 1.2E-27 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 97 | 329 | 4.6E-85 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 553 | 639 | 1.9E-34 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 640 | 787 | 2.2E-48 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 466 | 552 | 2.0E-34 | - |
| PIRSF | PIRSF002583 | HSP90_HTPG | 465 | 810 | 1.1E-100 | IPR001404 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 78 | 446 | 8.4E-129 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 120 | 129 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 170 | 187 | 4.9E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 188 | 205 | 4.9E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 217 | 239 | 4.9E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 100 | 120 | 4.9E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 121 | 143 | 4.9E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 290 | 308 | 4.9E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 272 | 289 | 4.9E-63 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 82 | 784 | 25.428854 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 320 | 340 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07770.1 | HEAT SHOCK PROTEIN 89.1. | 0 |
| RefSeq | XP_021630848.1 | - | 0 |
| F4JFN3 | Heat shock protein 90-6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HSP90-6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KL09 | Heat shock protein 83 isoform X2 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology