Basic Information
Locus ID:
nbisL1-mrna-20553
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Serine threonine-protein kinase-like protein CCR4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 8013998 | 8016382 | - | nbisL1-mrna-20553 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 86,805.08 Da | 53.41 | 84.96 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 491 | 773 | 9.22617E-93 | - |
| Pfam | PF00069 | Protein kinase domain | 486 | 769 | 2.7E-46 | IPR000719 |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 237 | 263 | 3.0E-6 | - |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 205 | 226 | 4.6E-6 | - |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 102 | 302 | 5.93E-21 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 469 | 771 | 2.7E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 460 | 573 | 1.3E-31 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 62 | 310 | 2.8E-24 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 574 | 778 | 2.4E-54 | - |
| SMART | SM00220 | serkin_6 | 485 | 775 | 1.1E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 485 | 784 | 38.49184 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 491 | 513 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 619 | 631 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 427 | 452 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 430 | 452 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 380 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_048227388.1 | serine/threonine-protein kinase-like protein CCR4 [Ricinus communis] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2QL76 | Serine/threonine-protein kinase-like protein CCR4 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology