halophFGD

Basic Information

Locus ID: nbisL1-mrna-20499

Species & Taxonomic ID: Rhizophora mangle & 40031

Genome Assembly: GCA_037832345.1

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
001341F_pilon	259120	260232	+	nbisL1-mrna-20499

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.59	8,522.72 Da	21.20	103.97	-0.02

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID

Best hit

Source	Best Hit ID	Description	E-value

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	7	jg10251, jg13896, jg2005, jg23556, jg37312, jg4724, jg4863
Aizoaceae	Mesembryanthemum crystallinum	10	gene_16209, gene_16210, gene_2231, gene_23548, gene_3286 ... gene_3290, gene_3291, gene_3292, gene_3293, gene_3294
Amaranthaceae	Atriplex hortensis	8	Ah003873, Ah018649, Ah018655, Ah018658, Ah018666, Ah018667 ... Ah018677, Ah022861
Amaranthaceae	Beta vulgaris	4	BVRB_1g003160, BVRB_3g052260, BVRB_3g052270, BVRB_5g098830
Amaranthaceae	Salicornia bigelovii	11	Sbi_jg15109, Sbi_jg15118, Sbi_jg15119, Sbi_jg24032 ... Sbi_jg3961, Sbi_jg49174, Sbi_jg55943, Sbi_jg55947, Sbi_jg55952, Sbi_jg55953, Sbi_jg7879
Amaranthaceae	Salicornia europaea	7	Seu_jg12165, Seu_jg26423, Seu_jg26425, Seu_jg26426 ... Seu_jg26430, Seu_jg26431, Seu_jg6069
Amaranthaceae	Suaeda aralocaspica	10	GOSA_00000576, GOSA_00010640, GOSA_00020030, GOSA_00020031 ... GOSA_00020033, GOSA_00020036, GOSA_00020038, GOSA_00020040, GOSA_00020041, GOSA_00025367
Amaranthaceae	Suaeda glauca	19	Sgl01377, Sgl01385, Sgl01386, Sgl01445, Sgl06451, Sgl06461 ... Sgl06462, Sgl06532, Sgl06543, Sgl06544, Sgl10915, Sgl16269, Sgl34867, Sgl40264, Sgl52209, Sgl52232, Sgl53358, Sgl57481, Sgl58621
Amaranthaceae	Chenopodium album	10	gene:ENSEOMG00000000507, gene:ENSEOMG00000000873 ... gene:ENSEOMG00000015370, gene:ENSEOMG00000022583, gene:ENSEOMG00000024572, gene:ENSEOMG00000032266, gene:ENSEOMG00000032403, gene:ENSEOMG00000035807, gene:ENSEOMG00000043538, gene:ENSEOMG00000045066
Amaranthaceae	Chenopodium quinoa	12	CQ.Regalona.r1.1AG0002100, CQ.Regalona.r1.2BG0026160 ... CQ.Regalona.r1.3AG0004660, CQ.Regalona.r1.3AG0004710, CQ.Regalona.r1.3AG0004820, CQ.Regalona.r1.3AG0004850, CQ.Regalona.r1.3BG0004780, CQ.Regalona.r1.3BG0004810, CQ.Regalona.r1.3BG0004860, CQ.Regalona.r1.3BG0004900, CQ.Regalona.r1.5AG0005820, CQ.Regalona.r1.5BG0006150
Anacardiaceae	Pistacia vera	6	pistato.v30005750, pistato.v30043600, pistato.v30134390 ... pistato.v30185150, pistato.v30215830, pistato.v30216680
Apiaceae	Apium graveolens	5	Ag11G05058, Ag11G05059, Ag6G01552, Ag6G02066, Ag7G01464
Asteraceae	Flaveria trinervia	7	Ftri11G17799, Ftri14G08304, Ftri14G29919, Ftri15G01300 ... Ftri2G17479, Ftri3G21947, Ftri7G05743
Brassicaceae	Arabidopsis thaliana	6	AT1G28040.1, AT2G25410.1, AT2G46494.1, AT2G46495.1 ... AT5G36001.1, AT5G53110.1
Brassicaceae	Eutrema salsugineum	3	Thhalv10001500m.g.v1.0, Thhalv10006034m.g.v1.0 ... Thhalv10013815m.g.v1.0
Brassicaceae	Schrenkiella parvula	5	Sp1g24210.v2.2, Sp1g24220.v2.2, Sp4g28500.v2.2 ... Sp5g01650.v2.2, Sp6g15280.v2.2
Brassicaceae	Brassica nigra	8	BniB01g000960.2N, BniB01g000970.2N, BniB01g000980.2N ... BniB02g031240.2N, BniB05g033040.2N, BniB06g061860.2N, BniB08g075930.2N, BniS06172g270.2N
Casuarinaceae	Casuarina equisetifolia	5	Ceq02G1260, Ceq03G0577, Ceq03G0578, Ceq03G0716, Ceq09G1593
Casuarinaceae	Casuarina glauca	3	Cgl02G1300, Cgl03G0684, Cgl03G0815
Malvaceae	Hibiscus hamabo Siebold & Zucc.	3	nbisL1-mrna-11276, nbisL1-mrna-6155, nbisL1-mrna-9535
Nitrariaceae	Nitraria sibirica	5	evm.TU.LG01.2893, evm.TU.LG10.1534, evm.TU.LG10.1537 ... evm.TU.LG10.1538, evm.TU.LG10.1539
Plantaginaceae	Plantago ovata	8	Pov_00004151, Pov_00005380, Pov_00005381, Pov_00005382 ... Pov_00006892, Pov_00010757, Pov_00020674, Pov_00041137
Plumbaginaceae	Limonium bicolor	4	Lb1G03661, Lb4G22028, Lb6G31391, Lb6G31392
Portulacaceae	Portulaca oleracea	14	evm.TU.LG01.1526, evm.TU.LG01.1527, evm.TU.LG04.2157 ... evm.TU.LG04.2158, evm.TU.LG04.3272, evm.TU.LG06.150, evm.TU.LG06.151, evm.TU.LG10.104, evm.TU.LG14.783, evm.TU.LG14.784, evm.TU.LG16.329, evm.TU.LG17.104, evm.TU.LG19.1276, evm.TU.LG24.1275
Rhizophoraceae	Bruguiera sexangula	5	evm.TU.Scaffold_14_RagTag.105, evm.TU.Scaffold_14_RagTag.384 ... evm.TU.Scaffold_16_RagTag.80, evm.TU.Scaffold_2_RagTag.1649, evm.TU.Scaffold_4258_RagTag.1
Rhizophoraceae	Carallia pectinifolia	5	nbisL1-mrna-10738, nbisL1-mrna-17971, nbisL1-mrna-18302 ... nbisL1-mrna-22328, nbisL1-mrna-3558
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-20135, nbisL1-mrna-2898, nbisL1-mrna-4367
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-20402, nbisL1-mrna-8335
Rhizophoraceae	Kandelia candel	5	add.evm.TU.utg000022l.250, evm.TU.utg000007l.134 ... evm.TU.utg000007l.333, evm.TU.utg000009l.313, evm.TU.utg000010l.436
Rhizophoraceae	Kandelia obovata	4	Maker00005977, Maker00009012, Maker00018335, Maker00018602
Rhizophoraceae	Rhizophora apiculata	5	nbisL1-mrna-15968, nbisL1-mrna-16167, nbisL1-mrna-17173 ... nbisL1-mrna-18186, nbisL1-mrna-2743
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-10711, nbisL1-mrna-10992, nbisL1-mrna-20499 ... nbisL1-mrna-6765
Salicaceae	Populus euphratica	8	populus_peu03685, populus_peu27566, populus_peu28069 ... populus_peu28072, populus_peu29505, populus_peu31563, populus_peu33916, populus_peu34533
Solanaceae	Lycium barbarum	7	gene-LOC132599973, gene-LOC132599974, gene-LOC132626353 ... gene-LOC132632061, gene-LOC132634063, gene-LOC132634789, gene-LOC132635153
Solanaceae	Solanum chilense	2	SOLCI002563300, SOLCI003475600
Solanaceae	Solanum pennellii	7	gene-LOC107012750, gene-LOC107025285, gene-LOC107027193 ... gene-LOC107028283, gene-LOC107030047, gene-LOC107030693, gene-LOC107031909
Tamaricaceae	Reaumuria soongarica	4	STRG.23332_chr05_+, gene_5255, gene_5256, gene_733
Tamaricaceae	Tamarix chinensis	6	TC01G3064, TC03G1953, TC06G0101, TC06G2510, TC10G1796 ... TC10G1797