Basic Information
Locus ID:
nbisL1-mrna-20489
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Short Name:
SAPK2
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001441F_pilon | 159162 | 159671 | - | nbisL1-mrna-20489 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.57 | 7,916.08 Da | 51.64 | 71.43 | -0.99 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.20.5.2650 | - | 1 | 69 | 6.3E-9 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 70 | - | - |
| Coils | Coil | Coil | 17 | 44 | - | - |
KEGG Pathway
Pathway:
ko01521 (EGFR tyrosine kinase inhibitor resistance)
map01521 (EGFR tyrosine kinase inhibitor resistance)
ko03010 (Ribosome)
map03010 (Ribosome)
ko04066 (HIF-1 signaling pathway)
map04066 (HIF-1 signaling pathway)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31700.2 | ribosomal protein S6. Encodes a putative ribosomal protein S6 (rps6a). RPS6A and RPS6B are fully redundant and essential during gametogenesis. | 0 |
| RefSeq | XP_050231087.1 | 40S ribosomal protein S6-like [Mercurialis annua] | 0 |
| Q9M3V8 | Small ribosomal subunit protein eS6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A426YVP8 | 40S ribosomal protein S6 OS=Ensete ventricosum OX=4639 GN=B296_00012738 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology