Basic Information
Locus ID:
nbisL1-mrna-2046
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000017F_pilon | 6898416 | 6902353 | - | nbisL1-mrna-2046 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.22 | 71,629.99 Da | 29.34 | 94.59 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 107 | 167 | 5.1E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 377 | 651 | 1.8E-32 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 1 | 32 | 7.4E-5 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 352 | 651 | 4.49E-50 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 9 | 200 | 2.81E-40 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 141 | 207 | 7.8E-15 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 347 | 451 | 2.0E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 140 | 8.2E-41 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 452 | 657 | 4.6E-32 | - |
| SMART | SM00220 | serkin_6 | 373 | 658 | 6.9E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 373 | 658 | 25.997385 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 379 | 401 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51560.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_012090406.1 | probable leucine-rich repeat receptor-like protein kinase At2g33170 [Jatropha curcas] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067JHW8 | Protein kinase domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_26224 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology