Basic Information
Locus ID:
nbisL1-mrna-20412
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Phosphatidylinositol 4-kinase gamma 2-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000058F_pilon | 2722316 | 2724720 | - | nbisL1-mrna-20412 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 65,105.74 Da | 40.00 | 89.26 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 114 | 183 | 6.95442E-11 | - |
| Pfam | PF00240 | Ubiquitin family | 44 | 108 | 3.9E-14 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 114 | 185 | 1.1E-8 | IPR000626 |
| Pfam | PF00454 | Phosphatidylinositol 3- and 4-kinase | 277 | 530 | 1.2E-51 | IPR000403 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 419 | 576 | 1.22E-7 | IPR011009 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 36 | 108 | 4.94E-12 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 84 | 185 | 4.05E-18 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 110 | 187 | 6.0E-10 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 23 | 109 | 4.3E-11 | - |
| SMART | SM00213 | ubq_7 | 112 | 185 | 1.9E-4 | IPR000626 |
| SMART | SM00213 | ubq_7 | 36 | 107 | 5.0E-4 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 112 | 189 | 13.227765 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 36 | 107 | 12.552728 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46500.1 | phosphoinositide 4-kinase gamma 4. Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro. | 0 |
| RefSeq | XP_021642629.1 | phosphatidylinositol 4-kinase gamma 2-like isoform X1 [Hevea brasiliensis] | 0 |
| Q9ZPY9 | Phosphatidylinositol 4-kinase gamma 4 OS=Arabidopsis thaliana OX=3702 GN=PI4KG4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9W9X3 | 1-phosphatidylinositol 4-kinase OS=Manihot esculenta OX=3983 GN=MANES_02G008900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology