Basic Information
Locus ID:
nbisL1-mrna-20399
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 484337 | 489815 | + | nbisL1-mrna-20399 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 66,461.05 Da | 33.44 | 91.19 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 312 | 575 | 3.08291E-87 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 307 | 577 | 1.1E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 286 | 578 | 2.83E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 377 | 597 | 1.9E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 291 | 376 | 1.6E-26 | - |
| SMART | SM00220 | serkin_6 | 306 | 580 | 9.9E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 306 | 581 | 39.283344 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 421 | 433 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 312 | 334 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 281 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 252 | 281 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_020537666.1 | lysM domain receptor-like kinase 3 isoform X4 [Jatropha curcas] | 0 |
| Q6UD73 | LysM domain receptor-like kinase 3 OS=Medicago truncatula OX=3880 GN=LYK3 PE=1 SV=1 | 0 | |
| TrEMBL | B9SH40 | Receptor protein kinase, putative OS=Ricinus communis OX=3988 GN=RCOM_1115620 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology