Basic Information
Locus ID:
nbisL1-mrna-20395
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000058F_pilon | 2635964 | 2637737 | - | nbisL1-mrna-20395 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.71 | 38,118.78 Da | 39.61 | 91.64 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 68 | 328 | 2.8E-15 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 66 | 330 | 6.37E-34 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 53 | 336 | 4.1E-33 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 57 | 334 | 21.912659 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24100.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_043805278.1 | probable inactive receptor kinase At3g08680 [Manihot esculenta] | 0 |
| Q9FL63 | Inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At5g24100 OS=Arabidopsis thaliana OX=3702 GN=At5g24100 PE=1 SV=1 | 0 | |
| TrEMBL | B9GXH2 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G138900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30134570 |
| Apiaceae | Apium graveolens | 1 | Ag8G00589 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_06.774.V1.1, AsparagusV1_06.877.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri13G14097, Ftri7G01338 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00028446 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_16_RagTag.89 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-22335 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-4375 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-20395 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000022l.444 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-3582 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-6756 |
| Salicaceae | Populus euphratica | 1 | populus_peu34525 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132637065 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC114078458 |