Basic Information
Locus ID:
nbisL1-mrna-20294
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
L-type lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 1996809 | 1998926 | - | nbisL1-mrna-20294 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.13 | 77,533.23 Da | 45.21 | 83.66 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 385 | 650 | 8.90707E-89 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 25 | 272 | 2.25003E-69 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 380 | 586 | 8.2E-42 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 31 | 274 | 3.9E-50 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 360 | 647 | 1.27E-73 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 27 | 272 | 9.06E-49 | IPR013320 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 340 | 456 | 5.0E-27 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 17 | 279 | 1.5E-55 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 457 | 654 | 3.5E-59 | - |
| SMART | SM00220 | serkin_6 | 379 | 649 | 3.6E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 379 | 659 | 36.060795 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 385 | 407 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 503 | 515 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 670 | 697 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42120.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_021652120.1 | L-type lectin-domain containing receptor kinase S.6 [Hevea brasiliensis] | 0 |
| Q9FHX3 | L-type lectin-domain containing receptor kinase S.6 OS=Arabidopsis thaliana OX=3702 GN=LECRKS6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2C9U1W1 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_18G089500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology