Basic Information
Locus ID:
nbisL1-mrna-20234
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Receptor protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 559068 | 562657 | - | nbisL1-mrna-20234 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.60 | 103,944.04 Da | 31.34 | 106.06 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 453 | 511 | 4.9E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 260 | 319 | 1.0E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 20 | 62 | 6.5E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 691 | 861 | 1.6E-31 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 69 | 416 | 2.28E-61 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 683 | 940 | 4.51E-55 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 375 | 613 | 1.87E-47 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 179 | 252 | 4.5E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 253 | 340 | 1.3E-24 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 767 | 862 | 2.7E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 341 | 619 | 7.7E-77 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 863 | 946 | 3.0E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 19 | 178 | 8.2E-37 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 656 | 766 | 1.3E-22 | - |
| SMART | SM00369 | LRR_typ_2 | 475 | 499 | 7.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 137 | 161 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 426 | 450 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 282 | 306 | 32.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 330 | 354 | 32.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 690 | 940 | 9.3E-12 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 571 | 594 | 390.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 258 | 281 | 90.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 690 | 956 | 29.007927 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 17 | 5.0 | - |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 811 | 823 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 571 | 584 | 9.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 285 | 298 | 9.9E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_021614141.1 | receptor protein kinase CLAVATA1 [Manihot esculenta] | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A2P2JCU4 | Non-specific serine/threonine protein kinase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology