Basic Information
Locus ID:
nbisL1-mrna-2021
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 16936895 | 16940037 | + | nbisL1-mrna-2021 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 72,054.73 Da | 43.14 | 79.64 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 325 | 597 | 8.01547E-95 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 143 | 237 | 1.3E-10 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 322 | 595 | 1.4E-45 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 44 | 128 | 1.2E-9 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 303 | 617 | 3.1E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 139 | 240 | 4.2E-15 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 279 | 394 | 7.8E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 395 | 606 | 4.3E-58 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 28 | 130 | 2.7E-13 | IPR038408 |
| SMART | SM00220 | serkin_6 | 319 | 611 | 1.1E-30 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 135 | 240 | 15.076722 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 29 | 130 | 15.411651 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 319 | 611 | 37.968884 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 325 | 347 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 440 | 452 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 612 | 641 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 599 | 648 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70520.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_039072089.1 | cysteine-rich receptor-like protein kinase 2 [Hibiscus syriacus] | 0 |
| Q9CAL3 | Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A3BBS4 | Cysteine-rich receptor-like protein kinase 2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110206pilonHSYRG00019 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology