halophFGD

Basic Information

Locus ID: nbisL1-mrna-20146

Species & Taxonomic ID: Rhizophora apiculata & 106626

Genome Assembly: GCA_037832385.1

Description: LRR receptor-like serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr12	208240	208570	+	nbisL1-mrna-20146

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.40	7,011.02 Da	31.04	100.47	-0.02

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	4	44	2.1E-5	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	8	45	3.77E-7	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	2	64	4.4E-7	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G31250.1	Leucine-rich repeat protein kinase family protein.
RefSeq	XP_034923536.1	probable LRR receptor-like serine/threonine-protein kinase At4g31250 [Populus alba]
Swiss-Prot	C0LGR9	Probable LRR receptor-like serine/threonine-protein kinase At4g31250 OS=Arabidopsis thaliana OX=3702 GN=At4g31250 PE=1 SV=1
TrEMBL	A0A6M2FA21	Protein kinase domain-containing protein OS=Populus davidiana OX=266767 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Atriplex hortensis	1	Ah028252
Rhizophoraceae	Rhizophora apiculata	1	nbisL1-mrna-20146