Basic Information
Locus ID:
nbisL1-mrna-20092
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001630F_pilon | 688260 | 697222 | - | nbisL1-mrna-20092 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 64,256.47 Da | 54.76 | 90.07 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 273 | 534 | 2.55983E-134 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 268 | 533 | 1.2E-67 | IPR001245 |
| SUPERFAMILY | SSF55021 | ACT-like | 156 | 219 | 6.25E-9 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 247 | 533 | 9.71E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 260 | 345 | 3.4E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 346 | 561 | 6.9E-59 | - |
| SMART | SM00220 | serkin_6 | 267 | 538 | 3.2E-59 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 267 | 538 | 43.000587 | IPR000719 |
| ProSiteProfiles | PS51671 | ACT domain profile. | 157 | 229 | 12.482168 | IPR002912 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 384 | 396 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 443 | 465 | 1.6E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 341 | 354 | 1.6E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 378 | 396 | 1.6E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 424 | 434 | 1.6E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 542 | 567 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38470.1 | ACT-like protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_021641347.1 | serine/threonine-protein kinase STY8-like isoform X2 [Hevea brasiliensis] | 0 |
| F4JTP5 | Serine/threonine-protein kinase STY46 OS=Arabidopsis thaliana OX=3702 GN=STY46 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A6MDV6 | Serine/threonine-protein kinase STY8-like OS=Hevea brasiliensis OX=3981 GN=GH714_006987 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology