Basic Information
Locus ID:
nbisL1-mrna-20
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 202821 | 207052 | + | nbisL1-mrna-20 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.11 | 87,321.95 Da | 41.20 | 86.97 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 454 | 751 | 1.74373E-120 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 423 | 738 | 1.6E-91 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 454 | 761 | 9.28E-66 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 456 | 755 | 1.3E-43 | IPR029044 |
| Coils | Coil | Coil | 220 | 240 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38270.2 | galacturonosyltransferase 3. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_021679008.1 | probable galacturonosyltransferase 3 isoform X2 [Hevea brasiliensis] | 0 |
| Q0WQD2 | Probable galacturonosyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=GAUT3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2P2KMV9 | Hexosyltransferase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology