Basic Information
Locus ID:
nbisL1-mrna-19993
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
mitogen-activated protein kinase kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 12120701 | 12121434 | + | nbisL1-mrna-19993 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.04 | 24,289.21 Da | 65.73 | 72.40 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 96 | 198 | 4.01E-11 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 90 | 210 | 1.1E-9 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 44 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21220.1 | MAP kinase kinase 5. Encodes a mitogen-activated kinase kinase, dual specific protein kinase that is expressed in vegetative tissues and floral buds. Involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK4.In plants with both MKK5 and MKK6 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission. | 0 |
| RefSeq | XP_010265373.1 | PREDICTED: mitogen-activated protein kinase kinase 5-like [Nelumbo nucifera] | 0 |
| Q8RXG3 | Mitogen-activated protein kinase kinase 5 OS=Arabidopsis thaliana OX=3702 GN=MKK5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A822ZQF3 | Protein kinase domain-containing protein OS=Nelumbo nucifera OX=4432 GN=HUJ06_003895 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-19480 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-12192 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-7050 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-19993 |