Basic Information
Locus ID:
nbisL1-mrna-19956
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the UDP-glycosyltransferase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000296F_pilon | 478029 | 479528 | + | nbisL1-mrna-19956 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 55,162.75 Da | 39.67 | 86.21 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03784 | GT1_Gtf-like | 9 | 453 | 5.42618E-66 | IPR002213 |
| Pfam | PF00201 | UDP-glucoronosyl and UDP-glucosyl transferase | 273 | 413 | 2.4E-19 | IPR002213 |
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | 8 | 484 | 1.22E-99 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 1 | 275 | 2.0E-56 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 276 | 465 | 6.2E-61 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12890.1 | UDP-Glycosyltransferase superfamily protein. | 0 |
| RefSeq | XP_002297794.2 | UDP-glycosyltransferase 92A1 [Populus trichocarpa] | 0 |
| Q9LXV0 | UDP-glycosyltransferase 92A1 OS=Arabidopsis thaliana OX=3702 GN=UGT92A1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6M2EUS3 | Glycosyltransferase OS=Populus davidiana OX=266767 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology