Basic Information
Locus ID:
nbisL1-mrna-19941
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000148F_pilon | 3014274 | 3019529 | + | nbisL1-mrna-19941 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 79,318.52 Da | 44.07 | 90.98 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 98 | 157 | 1.3E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 431 | 683 | 9.9E-21 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 70 | 5.4E-12 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 208 | 1.28E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 431 | 683 | 1.13E-36 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 392 | 500 | 3.5E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 230 | 2.6E-42 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 501 | 695 | 6.7E-29 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 383 | 687 | 17.206038 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_024437431.1 | protein MALE DISCOVERER 2 isoform X1 [Populus trichocarpa] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3N7FR10 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_011G067400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology