Basic Information
Locus ID:
nbisL1-mrna-19832
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Probably inactive leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 14051535 | 14053765 | + | nbisL1-mrna-19832 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.41 | 72,403.23 Da | 36.68 | 91.41 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 76 | 2.8E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 128 | 188 | 2.8E-11 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 358 | 623 | 3.6E-32 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 237 | 7.94E-32 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 358 | 627 | 1.94E-50 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 198 | 244 | 2.3E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 197 | 6.4E-35 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 322 | 428 | 9.9E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 429 | 645 | 8.4E-44 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 354 | 626 | 26.689951 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 631 | 651 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_034899585.1 | pollen receptor-like kinase 4 [Populus alba] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A836DCA7 | Leucine-rich repeat transmembrane protein OS=Salix suchowensis OX=1278906 GN=IMY05_C2394000100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology