Basic Information
Locus ID:
nbisL1-mrna-19824
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000148F_pilon | 1561131 | 1564020 | + | nbisL1-mrna-19824 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 58,647.76 Da | 36.68 | 78.08 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 33 | 470 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 312 | 470 | 1.1E-16 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 45 | 184 | 4.0E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 38 | 485 | 6.83E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 127 | 471 | 1.9E-68 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 20 | 126 | 7.6E-38 | - |
| SMART | SM00220 | serkin_6 | 44 | 470 | 4.4E-49 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 44 | 470 | 27.665197 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 50 | 73 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 171 | 183 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 492 | 527 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 304 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 264 | 279 | - | - |
| Coils | Coil | Coil | 527 | 527 | - | - |
| Coils | Coil | Coil | 223 | 243 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44850.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006384686.1 | uncharacterized protein LOC18098008 [Populus trichocarpa] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8A160 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_017957 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology