Basic Information
Locus ID:
nbisL1-mrna-19784
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 13586418 | 13587458 | - | nbisL1-mrna-19784 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.94 | 37,914.50 Da | 53.57 | 69.57 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 116 | 158 | 6.8E-10 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 161 | 206 | 1.1E-14 | IPR006652 |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 55 | 1.18E-7 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 83 | 268 | 1.02E-38 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 59 | 316 | 2.3E-39 | IPR015915 |
| SMART | SM00612 | kelc_smart | 123 | 171 | 5.1E-7 | IPR006652 |
| SMART | SM00612 | kelc_smart | 172 | 219 | 1.5E-9 | IPR006652 |
| SMART | SM00256 | fbox_2 | 13 | 53 | 3.6E-4 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59940.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_034887297.1 | - | 0 |
| Q9M1Y1 | F-box/kelch-repeat protein SKIP20 OS=Arabidopsis thaliana OX=3702 GN=SKIP20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U5PZ24 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology