Basic Information
Locus ID:
nbisL1-mrna-19750
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 13297384 | 13302727 | - | nbisL1-mrna-19750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 133,257.16 Da | 39.09 | 93.45 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 493 | 509 | 0.68 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 44 | 85 | 3.1E-8 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 149 | 168 | 1.8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 929 | 1199 | 2.8E-45 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 734 | 792 | 3.2E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 346 | 407 | 3.1E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 270 | 332 | 5.9E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 269 | 638 | 9.52E-64 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 334 | 2.41E-41 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 702 | 824 | 8.16E-27 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 908 | 1201 | 2.19E-75 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1003 | 1221 | 1.5E-57 | - |
| Gene3D | G3DSA:3.30.1490.310 | - | 648 | 705 | 0.0 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 893 | 1002 | 7.2E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 194 | 825 | 0.0 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 189 | 2.7E-28 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 113 | 136 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 544 | 567 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 591 | 615 | 73.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 755 | 778 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 344 | 368 | 38.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 927 | 1201 | 6.8E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 779 | 802 | 410.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 319 | 343 | 410.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 146 | 170 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 518 | 542 | 130.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 195 | 216 | 7.041994 | IPR001611 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 22 | 7.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 927 | 1204 | 37.855812 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 933 | 956 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1050 | 1062 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13380.1 | BRI1-like 3. Similar to BRI, brassinosteroid receptor protein. | 0 |
| RefSeq | XP_015580902.2 | receptor-like protein kinase BRI1-like 3 [Ricinus communis] | 0 |
| Q9LJF3 | Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana OX=3702 GN=BRL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251KZ86 | non-specific serine/threonine protein kinase OS=Manihot esculenta OX=3983 GN=MANES_05G203800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology