Basic Information
Locus ID:
nbisL1-mrna-19733
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Short Name:
CAX5
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 13156739 | 13161642 | + | nbisL1-mrna-19733 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.97 | 49,698.23 Da | 31.17 | 109.36 | 0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 104 | 259 | 7.8E-22 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 296 | 435 | 4.7E-22 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 280 | 439 | 8.5E-21 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 133 | 271 | 6.1E-16 | IPR044880 |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 85 | 438 | 1.4E-101 | IPR004798 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 73 | 438 | 3.6E-116 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_015583569.1 | - | 0 |
| Q8L783 | Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana OX=3702 GN=CAX5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2L0Q4 | Vacuolar cation/proton exchanger OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology