Basic Information
Locus ID:
nbisL1-mrna-19685
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 12736891 | 12738963 | + | nbisL1-mrna-19685 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.72 | 56,406.61 Da | 32.60 | 90.61 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 30 | 259 | 1.37239E-87 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 356 | 496 | 1.7E-29 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 30 | 257 | 1.3E-63 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 30 | 262 | 1.31E-63 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 338 | 499 | 5.33E-47 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 316 | 431 | 1.7E-30 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 27 | 261 | 4.6E-70 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 432 | 504 | 3.2E-19 | - |
| SMART | SM00220 | serkin_6 | 356 | 510 | 5.1E-7 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 356 | 510 | 26.124592 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 478 | 490 | - | IPR008271 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 142 | 148 | - | IPR019825 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 362 | 385 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_021669714.1 | probable L-type lectin-domain containing receptor kinase S.7 [Hevea brasiliensis] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A067L5B6 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology