Basic Information
Locus ID:
nbisL1-mrna-19586
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000198F_pilon | 97771 | 102682 | - | nbisL1-mrna-19586 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.20 | 62,372.04 Da | 48.42 | 77.45 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 142 | 223 | 4.60961E-15 | - |
| Pfam | PF00651 | BTB/POZ domain | 141 | 237 | 8.2E-15 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 263 | 355 | 9.4E-10 | IPR011705 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 438 | 551 | 5.17E-6 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 149 | 237 | 3.22E-13 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 272 | 378 | 2.4E-14 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 138 | 259 | 7.2E-19 | IPR011333 |
| SMART | SM00225 | BTB_4 | 141 | 240 | 5.1E-8 | IPR000210 |
| SMART | SM00875 | BACK_2 | 255 | 357 | 2.0E-9 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 145 | 209 | 12.432927 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_021653309.1 | BTB/POZ domain-containing protein POB1 [Hevea brasiliensis] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2L931 | Uncharacterized protein MANES_01G250200 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology