Basic Information
Locus ID:
nbisL1-mrna-1957
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 4448319 | 4452526 | - | nbisL1-mrna-1957 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 70,492.29 Da | 38.35 | 94.59 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 68 | 6.2E-12 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 353 | 609 | 3.8E-23 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 191 | 3.57E-25 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 333 | 609 | 6.73E-44 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 217 | 1.7E-35 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 326 | 432 | 3.5E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 433 | 619 | 1.0E-32 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 350 | 612 | 19.608818 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 271 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 271 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40270.2 | Protein kinase family protein. | 0 |
| RefSeq | XP_011001758.1 | PREDICTED: inactive receptor-like serine/threonine-protein kinase At2g40270 isoform X2 [Populus euphratica] | 0 |
| Q9SIZ4 | Inactive receptor-like serine/threonine-protein kinase At2g40270 OS=Arabidopsis thaliana OX=3702 GN=At2g40270 PE=2 SV=2 | 0 | |
| TrEMBL | B9HSK6 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G185300 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology