Basic Information
Locus ID:
nbisL1-mrna-19524
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 11520302 | 11521615 | + | nbisL1-mrna-19524 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.45 | 47,203.03 Da | 36.58 | 85.65 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 94 | 434 | 4.76633E-80 | IPR034161 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 289 | 430 | 1.0E-23 | IPR032799 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 95 | 267 | 3.4E-56 | IPR032861 |
| SUPERFAMILY | SSF50630 | Acid proteases | 88 | 434 | 1.23E-90 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 271 | 436 | 2.3E-41 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 77 | 267 | 1.9E-54 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 95 | 430 | 39.770275 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 316 | 327 | - | IPR001969 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_002523993.2 | aspartic proteinase CDR1 [Ricinus communis] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | B9SDC4 | Aspartic proteinase nepenthesin-1, putative OS=Ricinus communis OX=3988 GN=RCOM_1516300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology