Basic Information
Locus ID:
nbisL1-mrna-19514
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000181F_pilon | 1153997 | 1157569 | - | nbisL1-mrna-19514 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 31,818.86 Da | 37.38 | 80.67 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 37 | 174 | 1.5E-61 | IPR004854 |
| Gene3D | G3DSA:3.10.330.10 | - | 99 | 172 | 2.0E-34 | - |
| Gene3D | G3DSA:2.40.40.50 | - | 31 | 98 | 7.3E-25 | IPR042299 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G29070.1 | Ubiquitin fusion degradation UFD1 family protein. | 0 |
| RefSeq | XP_012067001.1 | ubiquitin fusion degradation protein 1 homolog [Jatropha curcas] | 0 |
| P70362 | Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Mus musculus OX=10090 GN=Ufd1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A067L4X4 | Ubiquitin fusion degradation protein 1 homolog OS=Jatropha curcas OX=180498 GN=JCGZ_02973 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology