Basic Information
Locus ID:
nbisL1-mrna-19507
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 4224389 | 4224688 | - | nbisL1-mrna-19507 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.46 | 10,701.88 Da | 58.88 | 82.63 | -0.08 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_037493664.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Jatropha curcas] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2P2MWM1 | Leucine-rich repeat family protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.1BG0012270 |
| Anacardiaceae | Pistacia vera | 10 | pistato.v30031320, pistato.v30031620, pistato.v30074900 ... |
| Arecaceae | Cocos nucifera | 1 | COCNU_06G018920 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp1g41770.v2.2 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G1812 |
| Cymodoceaceae | Cymodocea nodosa | 5 | gene.Cymno17g01410, gene.Cymno17g01450, gene.Cymno17g01460 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0190270.1 |
| Poaceae | Oryza coarctata | 1 | Oco08G015500 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-5847 |
| Posidoniaceae | Posidonia oceanica | 3 | gene.Posoc10g09750, gene.Posoc10g10990, gene.Posoc10g11090 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_1005_RagTag.1, evm.TU.Scaffold_709_RagTag.2 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-14844 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-7639 |
| Rhizophoraceae | Rhizophora apiculata | 4 | nbisL1-mrna-19507, nbisL1-mrna-6654, nbisL1-mrna-6655 ... |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-12777, nbisL1-mrna-12791 |
| Zosteraceae | Zostera marina | 1 | Zosma06g18860.v3.1 |