Basic Information
Locus ID:
nbisL1-mrna-19285
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
U3 small nucleolar RNA-associated protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 9231581 | 9233299 | - | nbisL1-mrna-19285 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.41 | 15,515.76 Da | 35.23 | 79.65 | -0.75 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 44 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021601392.1 | - | 0 |
| TrEMBL | A0A2P2LV96 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-19285 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-19243 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-6663 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000002l.640 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-13124 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-10083 |