Basic Information
Locus ID:
nbisL1-mrna-19253
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000121F_pilon | 300265 | 306218 | + | nbisL1-mrna-19253 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.85 | 110,153.18 Da | 42.38 | 82.43 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00014 | CH | 45 | 140 | 3.56276E-12 | IPR001715 |
| Pfam | PF00225 | Kinesin motor domain | 689 | 836 | 3.2E-55 | IPR001752 |
| Pfam | PF00307 | Calponin homology (CH) domain | 41 | 138 | 2.7E-14 | IPR001715 |
| Pfam | PF16796 | Microtubule binding | 528 | 687 | 1.7E-42 | IPR031852 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 42 | 137 | 9.69E-18 | IPR036872 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 541 | 875 | 7.98E-111 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 690 | 879 | 1.2E-67 | IPR036961 |
| Gene3D | G3DSA:1.10.418.10 | - | 34 | 149 | 2.8E-15 | IPR036872 |
| Gene3D | G3DSA:1.20.5.170 | - | 377 | 419 | 5.5E-7 | - |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 482 | 689 | 6.4E-55 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 539 | 845 | 2.2E-146 | IPR001752 |
| SMART | SM00033 | ch_5 | 41 | 136 | 2.8E-8 | IPR001715 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 39 | 141 | 17.062109 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 541 | 837 | 100.693016 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 787 | 808 | 2.9E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 616 | 637 | 2.9E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 707 | 724 | 2.9E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 738 | 756 | 2.9E-39 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 926 | 948 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 890 | 913 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 145 | 175 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 884 | 991 | - | - |
| Coils | Coil | Coil | 851 | 878 | - | - |
| Coils | Coil | Coil | 337 | 410 | - | - |
| Coils | Coil | Coil | 426 | 453 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63640.2 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain. | 0 |
| RefSeq | XP_024438091.2 | - | 0 |
| Q5JKW1 | Kinesin-like protein KIN-14C OS=Oryza sativa subsp. japonica OX=39947 GN=KIN14C PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T2X5K8 | Kinesin-like protein KIN-14K OS=Populus deltoides OX=3696 GN=H0E87_026028 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology