Basic Information
Locus ID:
nbisL1-mrna-19216
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
DnaJ molecular chaperone homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 13803020 | 13804288 | + | nbisL1-mrna-19216 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.13 | 47,112.38 Da | 39.27 | 61.92 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 83 | 125 | 8.72894E-5 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 82 | 134 | 1.79E-5 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 74 | 164 | 1.4E-6 | IPR036869 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 113 | 132 | - | IPR018253 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 297 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01710.1 | Chaperone DnaJ-domain superfamily protein. | 0 |
| RefSeq | XP_038697611.1 | uncharacterized protein LOC119995242 [Tripterygium wilfordii] | 0 |
| TrEMBL | A0A7J7DTP3 | J domain-containing protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW03G00067 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology