Basic Information
Locus ID:
nbisL1-mrna-19186
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 4416973 | 4418265 | + | nbisL1-mrna-19186 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 46,003.91 Da | 43.96 | 97.09 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 136 | 155 | 0.52 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 78 | 5.0E-6 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 158 | 173 | 0.29 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 93 | 396 | 3.17E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 207 | 402 | 7.6E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 206 | 9.1E-38 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17640.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_034927020.1 | probably inactive leucine-rich repeat receptor-like protein kinase IMK2 [Populus alba] | 0 |
| TrEMBL | A0A8X8CHB5 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_040448 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology