Basic Information
Locus ID:
nbisL1-mrna-19139
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002236F_pilon | 1524806 | 1534971 | + | nbisL1-mrna-19139 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 67,760.34 Da | 42.10 | 78.84 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11721 | Malectin domain | 375 | 502 | 9.6E-35 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 551 | 618 | 2.7E-11 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 533 | 615 | 1.97E-20 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 523 | 619 | 7.2E-31 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 322 | 509 | 3.7E-29 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 548 | 621 | 13.488796 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 554 | 576 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 331 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 191 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 160 | 175 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G07650.4 | - | 0 |
| RefSeq | XP_043818225.1 | - | 0 |
| C0LGE0 | Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana OX=3702 GN=At1g07650 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7XPB1 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Rhizophora mangle | 7 | nbisL1-mrna-19139, nbisL1-mrna-19142, nbisL1-mrna-24558 ... |