Basic Information
Locus ID:
nbisL1-mrna-19109
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000119F_pilon | 1783909 | 1792814 | - | nbisL1-mrna-19109 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 105,483.40 Da | 37.21 | 92.85 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 631 | 895 | 4.90959E-92 | - |
| Pfam | PF00069 | Protein kinase domain | 627 | 892 | 1.0E-45 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 76 | 2.8E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 49 | 406 | 3.4E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 611 | 908 | 1.07E-76 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 298 | 430 | 6.3E-11 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 595 | 700 | 3.7E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 193 | 297 | 2.6E-26 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 701 | 912 | 6.3E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 192 | 9.8E-35 | IPR032675 |
| SMART | SM00220 | serkin_6 | 625 | 899 | 1.2E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 625 | 899 | 38.293964 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 631 | 653 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 745 | 757 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 914 | 934 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 919 | 934 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021678206.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2 [Hevea brasiliensis] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2M563 | Putative LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology