Basic Information
Locus ID:
nbisL1-mrna-1901
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 15905670 | 15922451 | + | nbisL1-mrna-1901 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 80,352.49 Da | 51.58 | 87.18 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 458 | 704 | 7.30512E-121 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 453 | 706 | 5.1E-67 | IPR001245 |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 62 | 265 | 3.2E-69 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 425 | 706 | 7.65E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 531 | 717 | 5.6E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 445 | 530 | 2.8E-35 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 452 | 710 | 43.297401 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 458 | 479 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 567 | 585 | 3.9E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 614 | 624 | 3.9E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 526 | 539 | 3.9E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 633 | 655 | 3.9E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 677 | 699 | 3.9E-13 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03730.1 | Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. | 0 |
| RefSeq | XP_039071901.1 | serine/threonine-protein kinase CTR1-like isoform X2 [Hibiscus syriacus] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A3BFQ0 | Serine/threonine-protein kinase CTR1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110204pilonHSYRG00128 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology