Basic Information
Locus ID:
nbisL1-mrna-18920
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Serine threonine-protein kinase-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 5512264 | 5514624 | - | nbisL1-mrna-18920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 84,788.00 Da | 37.01 | 90.32 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 479 | 697 | 2.1E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 454 | 763 | 8.09E-72 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 154 | 309 | 2.27E-19 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 450 | 558 | 9.0E-33 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 58 | 320 | 1.4E-24 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 559 | 774 | 6.6E-51 | - |
| SMART | SM00220 | serkin_6 | 478 | 767 | 1.0E-22 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 478 | 743 | 36.456547 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 609 | 621 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 484 | 506 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55950.1 | CRINKLY4 related 3. | 0 |
| RefSeq | XP_034893683.1 | putative serine/threonine-protein kinase-like protein CCR3 [Populus alba] | 0 |
| Q9LY50 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X8DJ16 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_001961 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology