Basic Information
Locus ID:
nbisL1-mrna-18919
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 4705001 | 4709193 | - | nbisL1-mrna-18919 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 82,895.70 Da | 46.58 | 73.82 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13985 | STKc_GAK_like | 30 | 292 | 1.42118E-135 | - |
| Pfam | PF00069 | Protein kinase domain | 35 | 293 | 2.1E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 32 | 342 | 8.63E-62 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 14 | 311 | 2.3E-81 | - |
| SMART | SM00220 | serkin_6 | 31 | 301 | 1.4E-47 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 31 | 302 | 36.513081 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 156 | 168 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 542 | 613 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 395 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 315 | 332 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 347 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 572 | 586 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 644 | 663 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 430 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 544 | 558 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 315 | 350 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 406 | 420 | - | - |
| Coils | Coil | Coil | 484 | 539 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32850.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_052310209.1 | uncharacterized protein LOC18094975 [Populus trichocarpa] | 0 |
| Q86HW6 | Probable serine/threonine-protein kinase DDB_G0276461 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0276461 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8X8DE21 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg29067, jg31559 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_4393 |
| Amaranthaceae | Atriplex hortensis | 3 | Ah001151, Ah019162, Ah019163 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_3g048210, BVRB_5g116400 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg30478, Sbi_jg58774 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg28645 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00014994 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl55282, Sgl60548 |
| Amaranthaceae | Chenopodium album | 5 | gene:ENSEOMG00000000419, gene:ENSEOMG00000005907 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.5AG0022220, CQ.Regalona.r1.5BG0023650 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30231030 |
| Apiaceae | Apium graveolens | 1 | Ag1G00328 |
| Arecaceae | Cocos nucifera | 2 | COCNU_01G007230, COCNU_01G011580 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103718429, gene-LOC103720255, gene-LOC120103889 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_05.1458.V1.1, AsparagusV1_05.3089.V1.1 |
| Asteraceae | Flaveria trinervia | 3 | Ftri11G20316, Ftri12G12142, Ftri5G04599 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G32850.2 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10016354m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g15230.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB06g021970.2N, BniB08g020920.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G0526 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl05G0557 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno06g08640 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0271s00003.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g08120 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-2647 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG03.19 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00031073 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb7G34056 |
| Poaceae | Echinochloa crus-galli | 7 | AH03.1402, AH07.2419, BH03.1529, BH03.1539, BH07.2234 ... |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_2AG0135870, gene-QOZ80_2BG0191400 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.5HG0470980.1, HORVU.MOREX.r3.6HG0589870.1 |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_004319, gene-QYE76_023358, gene-QYE76_023373 ... |
| Poaceae | Oryza coarctata | 4 | Oco03G014040, Oco04G015610, Oco17G001550, Oco18G001490 |
| Poaceae | Oryza sativa | 2 | LOC_Os02g37880.1, LOC_Os09g10720.1 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_02G098300, gene-BS78_04G179500, gene-BS78_K207500 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0204396, Pt_Chr0702817 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr07G017230, Chr09G012930, Chr10G003200, Chr13G008800 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G400600 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC5AG028440, gene_TRIDC5BG029830 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS5A02G173300.1, TraesCS5B02G170700.1 ... |
| Poaceae | Zea mays | 4 | Zm00001eb094370_P001, Zm00001eb183460_P004 ... |
| Poaceae | Zoysia japonica | 4 | nbis-gene-18666, nbis-gene-28745, nbis-gene-29785 ... |
| Poaceae | Zoysia macrostachya | 3 | Zma_g13793, Zma_g16590, Zma_g29708 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG13.971, evm.TU.LG21.633 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g11070 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_7_RagTag.348 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-18919 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-7277 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-6946 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000028l.222 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00010460 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-8811 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-20132 |
| Salicaceae | Populus euphratica | 4 | populus_peu02221, populus_peu02222, populus_peu35592 ... |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132644462 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107008003 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_11617 |
| Tamaricaceae | Tamarix chinensis | 1 | TC05G1455 |
| Zosteraceae | Zostera marina | 1 | Zosma03g07510.v3.1 |