Basic Information
Locus ID:
nbisL1-mrna-18877
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 4039733 | 4051420 | - | nbisL1-mrna-18877 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 62,629.69 Da | 52.19 | 88.79 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 295 | 538 | 3.63477E-140 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 290 | 537 | 1.5E-72 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 266 | 537 | 8.12E-86 | IPR011009 |
| SUPERFAMILY | SSF55021 | ACT-like | 181 | 243 | 3.66E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 282 | 367 | 1.0E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 368 | 551 | 2.7E-63 | - |
| SMART | SM00220 | serkin_6 | 289 | 541 | 1.4E-66 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 289 | 541 | 45.855656 | IPR000719 |
| ProSiteProfiles | PS51671 | ACT domain profile. | 182 | 254 | 13.698376 | IPR002912 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 406 | 418 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 363 | 376 | 7.4E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 446 | 456 | 7.4E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 400 | 418 | 7.4E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 509 | 531 | 7.4E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 465 | 487 | 7.4E-19 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38470.1 | ACT-like protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_021641347.1 | serine/threonine-protein kinase STY8-like isoform X2 [Hevea brasiliensis] | 0 |
| F4JTP5 | Serine/threonine-protein kinase STY46 OS=Arabidopsis thaliana OX=3702 GN=STY46 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A6MDV6 | Serine/threonine-protein kinase STY8-like OS=Hevea brasiliensis OX=3981 GN=GH714_006987 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology