Basic Information
Locus ID:
nbisL1-mrna-18826
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 4619824 | 4631894 | - | nbisL1-mrna-18826 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 257,386.19 Da | 50.75 | 84.03 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01373 | KISc_KLP2_like | 186 | 533 | 2.16628E-178 | - |
| Pfam | PF00225 | Kinesin motor domain | 193 | 524 | 1.8E-107 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 187 | 555 | 3.05E-117 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 179 | 554 | 2.2E-134 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 185 | 532 | 1.8E-159 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 187 | 524 | 117.742638 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 420 | 431 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 421 | 439 | 1.7E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 388 | 405 | 1.7E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 474 | 495 | 1.7E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 259 | 280 | 1.7E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 117 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 77 | 116 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2230 | 2257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2000 | 2023 | - | - |
| Coils | Coil | Coil | 1851 | 1906 | - | - |
| Coils | Coil | Coil | 1014 | 1041 | - | - |
| Coils | Coil | Coil | 2164 | 2198 | - | - |
| Coils | Coil | Coil | 1696 | 1786 | - | - |
| Coils | Coil | Coil | 1942 | 1969 | - | - |
| Coils | Coil | Coil | 1795 | 1822 | - | - |
| Coils | Coil | Coil | 611 | 631 | - | - |
| Coils | Coil | Coil | 858 | 878 | - | - |
| Coils | Coil | Coil | 697 | 724 | - | - |
| Coils | Coil | Coil | 2105 | 2142 | - | - |
| Coils | Coil | Coil | 2040 | 2060 | - | - |
| Coils | Coil | Coil | 1668 | 1688 | - | - |
| Coils | Coil | Coil | 674 | 694 | - | - |
| Coils | Coil | Coil | 531 | 558 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17360.3 | - | 0 |
| RefSeq | XP_021642902.1 | kinesin-like protein KIN-12C isoform X1 [Hevea brasiliensis] | 0 |
| Q27IK7 | Kinesin-like protein KIN-12C OS=Arabidopsis thaliana OX=3702 GN=KIN12C PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2XSD8 | Kinesin motor domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_019314 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology