Basic Information
Locus ID:
nbisL1-mrna-18724
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 13215561 | 13216145 | + | nbisL1-mrna-18724 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 22,921.77 Da | 50.64 | 79.43 | -0.61 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_030927243.1 | uncharacterized protein LOC115953643 [Quercus lobata] | 0 |
| TrEMBL | A0A7N2M4Q7 | F-box domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 3 | pistato.v30285360, pistato.v30285370, pistato.v30285390 |
| Apiaceae | Apium graveolens | 3 | Ag5G00177, Ag8G00115, Ag8G00116 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG01.1075, evm.TU.LG10.698 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.1762 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-5563 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-1417 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-18724 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-13722 |
| Solanaceae | Solanum chilense | 3 | SOLCI001505700, SOLCI003744300, SOLCI006902700 |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107029936, gene-LOC107029937, gene-LOC114076361 |